Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKD-------------ERIPNSYGVVGQETNGPGGMFKGLRTIP---VILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKD----VTKDVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPI-DYLRY-YWQTKQQLEDQARAYAEHG---------TRAEVVKKVEAELFELYKQEELAEKP--KQLEQR-----GGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETN-----CVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK |
| 1VJT Chain:A ((14-467)) | -----KISIIGAGSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYVEELNSPVKIVKTSSLDEAIDGADFIINT--AYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDMKLALEIAEKMKKMAPKAYLMQTANPVFEITQAVRRWTG-ANIVGFCHGVAGV-YEVFEKLDLDPEEVDWQVAGVNHGIWLNRFRYRGEDAYPLLDEWIEKKLPEWEPKNPWDTQMSPAAMDMY-KFYGMLPIGDTVRNGSWKYHYNLETKKKWFGKFGGIDNEVERPKFHEQLRRARERLIKL--AEEVQQNPGMKLTEEHPEIFPKGKLSGEQHIPFINAIANNKRVRLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKVEPDLTHR--IKIFYLWPRILRME-WNLEAYISRDRKVLEEILIRDPRTKSYEQIVQVLDEIF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133649 for 3310 contacts (-40.4/contact) +
2D Compatibility (PS) -44867 + (NN) -21706 + (LL) 2160
1D Compatibility (HY) -16000 + (ID) 5500
Total energy: -219562.0 ( -66.33 by residue)
QMean score : 0.488
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