Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNENHIVHEC----QILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL
3A0S Chain:A ((5-40))
-----------------------------------------------------------IITLSKDGRITEWNKKAEQLFGLKK-------ENVLGRRLKDL----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9560 for 162 contacts (-59.0/contact) +
2D Compatibility (PS) -3309 + (NN) -123 + (LL) 8824
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -6468.0 ( -39.93 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_3A0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0S-query.scw
PDB file :
Tito_Scwrl_3A0S.pdb
: