Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKKF-----VSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVNVAGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK
4AQ1 Chain:A ((390-549))------------------------------------------------------------------------------------------------------------------------MFAGETKTVAMY---DTKNGDPETKP----VDFKDATVRSLNPIIATAAINGSELLVT---ANAGQSGKASFEVTFKD---------NTKRT----FTVDVKKEPVLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDNTIDFDSGN--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7062 for 863 contacts (8.2/contact) +
2D Compatibility (PS) -16289 + (NN) 207 + (LL) 11416
1D Compatibility (HY) -4000 + (ID) 1950
Total energy: -3554.0 ( -4.12 by residue)
QMean score : 0.107

(partial model without unconserved sides chains):
PDB file : Tito_4AQ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AQ1-query.scw
PDB file : Tito_Scwrl_4AQ1.pdb: