Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKKF-----VSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVNVAGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
4AQ1 Chain:A ((390-549)) | ------------------------------------------------------------------------------------------------------------------------MFAGETKTVAMY---DTKNGDPETKP----VDFKDATVRSLNPIIATAAINGSELLVT---ANAGQSGKASFEVTFKD---------NTKRT----FTVDVKKEPVLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDNTIDFDSGN-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7062 for 863 contacts (8.2/contact) +
2D Compatibility (PS) -16289 + (NN) 207 + (LL) 11416
1D Compatibility (HY) -4000 + (ID) 1950
Total energy: -3554.0 ( -4.12 by residue)
QMean score : 0.107
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