Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLKKVPHNIL--DVRDADAFVEGHIPDAINIPINELPEKLAT-LDKEKAYTIICY---AGGRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN
3NHV Chain:A ((22-108))
--------DLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKF-AQLGFRVKELIGGI---------
General information:
TITO was launched using:
RESULT:
Template:
3NHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31791 for 559 contacts (-56.9/contact) +
2D Compatibility (PS) -9131 + (NN) -4928 + (LL) 1080
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -52970.0 ( -94.76 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3NHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NHV-query.scw
PDB file :
Tito_Scwrl_3NHV.pdb
: