Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
1HYM Chain:A ((6-14))
-KSSWPHLVG----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HYM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 470 for 20 contacts (23.5/contact) +
2D Compatibility (PS) -911 + (NN) -1375 + (LL) 8380
1D Compatibility (HY) -800 + (ID) 200
Total energy: 5564.0 ( 278.20 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_1HYM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYM-query.scw
PDB file :
Tito_Scwrl_1HYM.pdb
: