Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VRKLGLMTILFWMFLSVQAFAADLEPPMISLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVEDLFEVKQLEEVAKDETAPSLKMIEITHDEDVLPTSVLYASAELDDAESGVKQAILLVHSKSNESEMELIRNNYTGEFDAEIPLEKFQLGEELTFQLQLVDFAENEITLDLENTIQLYEPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTATEWKGSLALTTELSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFS-KQMNQEIKPVIEMPDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
1TOU Chain:A ((50-116)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVE---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1132 for 357 contacts (3.2/contact) +
2D Compatibility (PS) -7183 + (NN) -2344 + (LL) 28612
1D Compatibility (HY) -800 + (ID) 950
Total energy: 18467.0 ( 51.73 by residue)
QMean score : 0.328
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