Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVGNNIAKSYPNKL-VLQNVDFEAKSGDMIVLTGENGSGKTTLLDMLASLKKPDSGTLELDNELFTTNDIRQQIAYLNNELYAKKSTTIEDFMKQHGLLFENIELDKWDRLLAGWRINKRLK---------------LGELSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMARSEVMKAIISETNPD--AITIISSHHLEGTEKLYSKLWLIKDNTLQTIET-ETYREETGNALIDFYKEEMNK |
| 1Z47 Chain:A ((19-250)) | -----GVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYA---------LFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRE-LRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54626 for 1639 contacts (-33.3/contact) +
2D Compatibility (PS) -22168 + (NN) -2058 + (LL) 1148
1D Compatibility (HY) -11200 + (ID) 2650
Total energy: -91554.0 ( -55.86 by residue)
QMean score : 0.484
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