Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIENRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFALWEVEQHHETKSPYRFERLDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMANVLKN |
| 2NVP Chain:A ((7-421)) | ---ELKEIVRKIGKDLSGKIEDKKLQELFYNCFINTMDTTVEVSE-GDAFVITGDIPAMWLRDSTSQVEHYLPFVKEYPELKAIFTGLINRQVKCIFIDPYANAFNKEPNGQKWDNDITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNDDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDE-ELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGNYNFMDDANVPSLLSIPYLEYKGIEDEVYQNTRKFILSKNNRFFFEGKAAKGIGSPHTPDQYIWHIALSMQGLTTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPTKFTRDWFAWSNSLFSHFIYE------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35364 for 3599 contacts (9.8/contact) +
2D Compatibility (PS) -42202 + (NN) -11040 + (LL) 2088
1D Compatibility (HY) 16000 + (ID) 1350
Total energy: -1140.0 ( -0.32 by residue)
QMean score : ?
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