Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGM-TADMLREEIQKTKALTDKAFGVNLMLMMTN----IAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTT--MALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEE-NADRDTLEELTLGSL-RKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK |
| 2GJN Chain:A ((8-317)) | --FTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209777 for 2715 contacts (-77.3/contact) +
2D Compatibility (PS) -32819 + (NN) -12371 + (LL) 672
1D Compatibility (HY) -18000 + (ID) 5600
Total energy: -277895.0 ( -102.36 by residue)
QMean score : 0.506
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