Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLCTISDSQALLEVSYKTFDETFRAQNKPENMDAYLKTNFTAKKLSDELKNPHS----YFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKKGLGKELFNQAIEIAKEVDAKKIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQTDIIMIKDL
3FIX Chain:A ((29-167))
-IRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIEL--------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGF------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88678 for 944 contacts (-93.9/contact) +
2D Compatibility (PS) -14373 + (NN) -2349 + (LL) 1892
1D Compatibility (HY) -11200 + (ID) 1800
Total energy: -116508.0 ( -123.42 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_3FIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FIX-query.scw
PDB file :
Tito_Scwrl_3FIX.pdb
: