Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFETVK-RDGFLIEKGPDSFLARKPAG------VGLVKDLGLEDKLIA-----NATGRSYIYHQKALHPIPEGSVMGI--PTDKEALLASTLVSEIGKARALQEPTMERNNQERDQALGDFFEARFGKELVKTIIEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLKESSMQTTGTKATI--------GAFRTLEGGLDALPKAIAAALPKENLHTAKQATEI---VKKNNAYEISFADGDKMEADGVIIAATHDALIHLL---AETTTEPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACTWVQKKWPHM--VPKNKMLLRGFVGKAGETWLE--QASDEAIVSAVLRDYAE-----IMDLHAAPLFYEVSRMKSAMPQYLVNHQDRLKQLKKNIKTDYPGVFFAGMSYEGVGIPDCIAGAQTAAKELVDYLEEV |
| 4IVO Chain:B ((9-473)) | -RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPQGI---RPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTG-LR--PSPPFSKPLFWAGL-------RELTKP----RGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLG-----QPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRD-SSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPG---LRVTV-MLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181509 for 3551 contacts (-51.1/contact) +
2D Compatibility (PS) -44499 + (NN) -11969 + (LL) 3260
1D Compatibility (HY) -28800 + (ID) 6100
Total energy: -269617.0 ( -75.93 by residue)
QMean score : 0.476
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