Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNLIQMARNKRK---
1LBJ Chain:A ((1-22))
----------------------------------FVPIFTYGELQRMQEKERNKGQ
General information:
TITO was launched using:
RESULT:
Template:
1LBJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10229 for 78 contacts (-131.1/contact) +
2D Compatibility (PS) -1912 + (NN) 636 + (LL) 4056
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -8899.0 ( -114.09 by residue)
QMean score : 0.864
(partial model without unconserved sides chains):
PDB file :
Tito_1LBJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LBJ-query.scw
PDB file :
Tito_Scwrl_1LBJ.pdb
: