Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFHVKQNNNLAVGEVDVYCHPDNLEEVTNIVMGIDEPTEKISVKKDGATYLLEPKAILYFEAVESKIFVYTEKEIYEIHWKLYELEEKFKDSSFFRCSKSMILNIEWIEKIAPGFHGKFEAKLFNREKVIISRQYAKVLKQKLNMGGKRK
1DS9 Chain:A ((10-64))
--------------------------------------------------------AIRIFE--ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DS9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8884 for 332 contacts (-26.8/contact) +
2D Compatibility (PS) -5478 + (NN) 3450 + (LL) 6368
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -6344.0 ( -19.11 by residue)
QMean score : -0.134
(partial model without unconserved sides chains):
PDB file :
Tito_1DS9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DS9-query.scw
PDB file :
Tito_Scwrl_1DS9.pdb
: