Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYN----QDFLIVLGSGL--IGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 4MFZ Chain:A ((184-256)) | -----------------------------------------------------------------------------------------------------------------------------------------------WLTLLVRGLVYRLGRLQYNLAVAKDGTPVLGLHIPEVGGPLIPDIYYDSLRRARPFFERHFPEHGARAATGTS-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18327 for 382 contacts (-48.0/contact) +
2D Compatibility (PS) -6967 + (NN) -1156 + (LL) 25852
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -6798.0 ( -17.80 by residue)
QMean score : 0.172
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