Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGE-----PLLRTDIVEIVRGLGAIPEIEDISITTN-AMYLAKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG |
| 3CIX Chain:A ((51-224)) | ----------VHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYR-MTPEEIVERARLAVQFGAKTIVLQSGEDPYYMPDVISDIVKEIKKMG-------VAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDM--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63154 for 1242 contacts (-50.8/contact) +
2D Compatibility (PS) -18346 + (NN) -5586 + (LL) 10128
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -86258.0 ( -69.45 by residue)
QMean score : 0.480
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