Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDF-DYASYYHADVTIHSGTFNECRNADIVVFF----QEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFE--NKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
| 3WSW Chain:A ((3-315)) | --KTSRKVVIVGTGFVGTSIAYAMINQGVANELVLIDVNQEKAEGEALDLLDGMAWGEKNVSVWSGTYEECQDANLVILTAGVNQKPGQTRLDLVKTNATITRQIVKEVMASGFDGIFVVASNPVDILTYLTWQESGLPASRVVGTGTTLDTTRFRKEIALKLAVDPRSVHGYILGEHGDSEVAAWSHTTVGGKPIMEYVEKDH-RLEEND---LTVLADKVKNAAYEIIDRKKATY-YGIGMSTTRIVKAILNNEQAVLPVSAYLNGEYGEED-IFTGVPSIVDENGVREIIDLSITPQEKAMFHQSVSELKAVLDTVRL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268771 for 2613 contacts (-102.9/contact) +
2D Compatibility (PS) -32972 + (NN) -14518 + (LL) 124
1D Compatibility (HY) -20400 + (ID) 4300
Total energy: -340837.0 ( -130.44 by residue)
QMean score : 0.674
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