Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKMPEMLSFISEEAVSRKMTSEEIAAHFGYDKHHFSRKFKEINGFSVVEFLSSLKVEKAIIELD-EEVRILDLQEHSGFESSGSFTNTFKKYTGSSPRKYKTEMNDIFYDMKRFENDNKDKSIAHFQENNDSFCNVTIDVPDEFEKGIIFIGLFRTLIPNHMPISGLATKNLIGNQLKNIPSGDYYLLACAISQSNNILSYFNLSNSLRGKEDEKLSFPKCSGNHYAIKLRKPIPEDPPILANVGKILISCLKNTI |
3W6V Chain:A ((58-133)) | -----------------------ETLAARAYMSRRTFDRRFRSLTGSAPLQWLITQRVLQAQRLLETSDYSVDEVAGRCGFRSPVALRGHFRRQLGSSP--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3236 for 476 contacts (-6.8/contact) +
2D Compatibility (PS) -8212 + (NN) -4540 + (LL) 10428
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -9710.0 ( -20.40 by residue)
QMean score : 0.555
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