Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGS-------LIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIEL--QYTARASHALEKAFGAPVGKAFGLMVGAP--AGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI |
3GFH Chain:A ((16-186)) | ----------------------VIASVNADFARELKLPPHIRSLGLISADSDDVTYI-AADEATKQAMVEVV---YGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGI---DAALKSADVQLATYVPPPSETNYS-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58275 for 1148 contacts (-50.8/contact) +
2D Compatibility (PS) -16900 + (NN) -6111 + (LL) 5132
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -90254.0 ( -78.62 by residue)
QMean score : 0.307
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