Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
1G8K Chain:A ((727-751)) | --------------------------------------------------------------------------------------------------------------------------------------------YIEMNPDDCKQLDVTGGDIVEVYND---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7494 for 93 contacts (-80.6/contact) +
2D Compatibility (PS) -2698 + (NN) -491 + (LL) 13724
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 741.0 ( 7.97 by residue)
QMean score : 0.602
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