Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYIKNPAKIEEKSFEIIQQIIDDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDTNMALSGINK-RLLDELGCKYHCYVSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMVESGQLQADAVVAVPVGFVGAAECKEEILETD--IPAIVARGRKGGSNLAAAIINAILITM
3E7D Chain:A ((4-203))
--YIRDGQAIYDRSFAIIRAEAD-LR---HIPADLEKLAV-RVIHACGMVDVANDLAFSEGAGKAGRNALLAGAPILCDARMVAEGITRSRLPADNRVIY--TLSDPSVPELAKKIGNTRSAAALDLWLPHIEGSIVAIGNAPTALFRLFELLDAGAPKPALIIGMPVGFVGAAESKDELAANSRGVPYVIVRGRRGGSAMTAAAVNAL----
General information:
TITO was launched using:
RESULT:
Template:
3E7D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155414 for 1696 contacts (-91.6/contact) +
2D Compatibility (PS) -21733 + (NN) -9967 + (LL) 732
1D Compatibility (HY) -10800 + (ID) 3450
Total energy: -200632.0 ( -118.30 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_3E7D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E7D-query.scw
PDB file :
Tito_Scwrl_3E7D.pdb
: