Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQAGYKIIPVNPNADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
2E6U Chain:X ((11-133))
----TDEDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVANRCM--------
General information:
TITO was launched using:
RESULT:
Template:
2E6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108283 for 989 contacts (-109.5/contact) +
2D Compatibility (PS) -13212 + (NN) -1940 + (LL) 956
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -132979.0 ( -134.46 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_2E6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E6U-query.scw
PDB file :
Tito_Scwrl_2E6U.pdb
: