Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTQERKNEIIAEYRVHDTDTGSPEVQIAVLTAEINSLNEHVRVHKKDHHSYRGLMKMVGHRRNLLTYLRKKDVQRYRELIKRLGLRR
4A5U Chain:B ((1-88))
-SLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHF--------SRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR
General information:
TITO was launched using:
RESULT:
Template:
4A5U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23561 for 502 contacts (-46.9/contact) +
2D Compatibility (PS) -8701 + (NN) -4263 + (LL) 684
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -47241.0 ( -94.11 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_4A5U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A5U-query.scw
PDB file :
Tito_Scwrl_4A5U.pdb
: