Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEIIDGKKLAKEIQEKVTREVAELVKE--GKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEH--ISEEKVIDTISFDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMD-RDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKMN |
| 1A4I Chain:A ((4-294)) | -AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY-----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172952 for 2417 contacts (-71.6/contact) +
2D Compatibility (PS) -29836 + (NN) -10929 + (LL) 524
1D Compatibility (HY) -27200 + (ID) 6750
Total energy: -247143.0 ( -102.25 by residue)
QMean score : 0.638
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