Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTSPFSLKSRSLKFKWTFGASAAIFLTFFLFSYAIYQGIGQMLLNEEEPEVKELLLATTSTLTNQDLTDNEEIKYLFNNDKTVNRKLQDQVINLYDKDGHFINKYYFSRSQDITSIDFSQYFVSGTDKFIMNKPTIDGQKMMTAQMPIVADDNTTVIGYAQVVNPLTSYNRMMDRLLVTMILLGAVALFISGMLGYLLAQNFLNPLTRLARTMNDIRKNGFQKRIETKTNSRDEIGELTVVFNDMMTRIETSFEQQKQFVEDASHELRTPVQIMEGHLKLLTRWGKDDPAVLDESLNASLTELERMKKLVQEMLDLSRAEQ----ISQTKEL-----QITDVNA-TVEQVRRNFEVMYENFTFTLKEDDTDLRALIQHNHLEQILIIIMDNAVKYSGDGTEVDMHVYKEQKQIHIDVRDYGEGISQEEIDKIFNRFYRVDKARSREKGGNGLGLAIAKQLVEGYLGTINAVSEPDKGTTIKITLPYIEPKSK |
4BIX Chain:A ((61-293)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-GASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGES-----KELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNP---------NALESALENIVRNALRYSHTKIEVGFAVDKDG--ITITVDDDGPGVSPEDREQIFRPFYRTD--------GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48416 for 1456 contacts (-33.3/contact) +
2D Compatibility (PS) -23381 + (NN) -11422 + (LL) 19372
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -79097.0 ( -54.32 by residue)
QMean score : 0.433
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