Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGY------SPEQKKQMKI------------IGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK |
| 4DJK Chain:A ((376-459)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPD---------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19999 for 168 contacts (-119.0/contact) +
2D Compatibility (PS) -4163 + (NN) -1820 + (LL) 20880
1D Compatibility (HY) -8000 + (ID) 900
Total energy: -14002.0 ( -83.35 by residue)
QMean score : 0.164
|
|
|