Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELS-LTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGE-FDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER |
3NEM Chain:A ((241-323)) | ----------------EEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDK---------ALEILGDLGKEIPWGEDIDTEGERLLGKYMMENENA------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10886 for 434 contacts (25.1/contact) +
2D Compatibility (PS) -8709 + (NN) -3912 + (LL) 6264
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -2921.0 ( -6.73 by residue)
QMean score : 0.052
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