Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
4HF0 Chain:A ((1-132))
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVD-------AQGGDKALTHALWRDLSDRLTGFLNNITLGELVNN--------------
General information:
TITO was launched using:
RESULT:
Template:
4HF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64356 for 833 contacts (-77.3/contact) +
2D Compatibility (PS) -12758 + (NN) -4320 + (LL) 1288
1D Compatibility (HY) -12400 + (ID) 2050
Total energy: -94596.0 ( -113.56 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_4HF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HF0-query.scw
PDB file :
Tito_Scwrl_4HF0.pdb
: