Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQESYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTL--LHQDGLAN-LLVDP---VDVVISDLPVGY------YP-------DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ |
| 1G38 Chain:A ((2-165)) | -----------------------------------------------------------------------------------------------ETPPEVVDFMVS-----LAEAPRGGRVLEPACAHGPFL---------RAFREAHGTGYR---------FVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFL--EKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80285 for 1088 contacts (-73.8/contact) +
2D Compatibility (PS) -15141 + (NN) -1210 + (LL) 16652
1D Compatibility (HY) -16000 + (ID) 2150
Total energy: -98134.0 ( -90.20 by residue)
QMean score : 0.441
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