Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQ-VTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDGKVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNAITLSDHRDLSFGEAYGVIMKE---LRLLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIEAAKKA
2XPE Chain:A ((4-167))
---TVHFQGNPVSVAGKLPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAALK--
General information:
TITO was launched using:
RESULT:
Template:
2XPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67564 for 1243 contacts (-54.4/contact) +
2D Compatibility (PS) -17609 + (NN) -3917 + (LL) 588
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -108352.0 ( -87.17 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2XPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XPE-query.scw
PDB file :
Tito_Scwrl_2XPE.pdb
: