Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELIKGNIASPKGFYADGKHAGLKRKRNDIGWIYSEVPANAAAVYTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLEIPLDSVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEAILTTDTFQKQISFQTEIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAI-PAELLQKLLKIKVDKTFNQITVDGDTSTNDMVVVMANGCAENPMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKLIEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPD--NITIKIGGIEILNHSSQTIYNQQALDA--YLEEEHIIIEVDLHIGLESGTAWGCDLSYEYVKINACYRT
2YEP Chain:F ((1-212))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLLTFFATDARLDPAEQ-DRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLA-------GEVDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP-------------AEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSEYT-


General information:
TITO was launched using:
RESULT:

Template: 2YEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108235 for 1450 contacts (-74.6/contact) +
2D Compatibility (PS) -21245 + (NN) -10855 + (LL) 13748
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -145137.0 ( -100.09 by residue)
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_2YEP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YEP-query.scw
PDB file : Tito_Scwrl_2YEP.pdb: