Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPVEEKATEETTEA
1IBK Chain:B ((7-240))
-----VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ----------
General information:
TITO was launched using:
RESULT:
Template:
1IBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80584 for 1940 contacts (-41.5/contact) +
2D Compatibility (PS) -25489 + (NN) -16617 + (LL) 1360
1D Compatibility (HY) -22400 + (ID) 6300
Total energy: -150030.0 ( -77.34 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1IBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBK-query.scw
PDB file :
Tito_Scwrl_1IBK.pdb
: