Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFSTSNHYHAICNV-CGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
4RAZ Chain:A ((11-134))
--------------LIDKGLKVTDQRRVIAQVLSDSADHPDVEEVYRRATAKDPRISIATVYRTVRLFEEESILERHDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFRLVGHRLELYGV-----------
General information:
TITO was launched using:
RESULT:
Template:
4RAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62270 for 769 contacts (-81.0/contact) +
2D Compatibility (PS) -13251 + (NN) -3482 + (LL) 1708
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -87895.0 ( -114.30 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_4RAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RAZ-query.scw
PDB file :
Tito_Scwrl_4RAZ.pdb
: