Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYT----------ELIANELGTKAFYESIKD------------NRILEMFYDDPKRWAFALQIYFLNTRFR----SIKAALTDQNN---VLDRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGL-LEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
2ZI3 Chain:A ((39-245))
----RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFG--QSLELDGIIYLQATPETCLHRIYLRGRNEEQ-----GIPLEYLEKLHYKHESWLL----HRTLKTNFD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78150 for 1243 contacts (-62.9/contact) +
2D Compatibility (PS) -18968 + (NN) -7512 + (LL) 2252
1D Compatibility (HY) -13600 + (ID) 3100
Total energy: -119078.0 ( -95.80 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI3-query.scw
PDB file :
Tito_Scwrl_2ZI3.pdb
: