Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFGTTTIGIDLGTANILVYSKEKGIILNEPSVVALNTNDGTVLAIGQEAKEMIGKTPTSISAVRPMKDGVIADFDLTSGLLREIMRRISVS-GVRKPNVVVCTPTGATSVERRAISDAVRSTGARSVVLIEEPVAAAIGADLPVAEPVANVIVDIGGGTSEIAIISYGGVVSSTSIRTGGDHMDEEIIQYIRKNYNLLIGQTTAERIKMELG--YAPIEHVTQTADIRGRDLLTGLPKTIQVSSTEIQSALAETLQRILEAIRNTLELCPPELSGDIVDRGIILSGGGSLLQGFRDWLVEEIDVPVHMAPSPLESVAIGTGRSLVFADKLAKN |
1JCE Chain:A ((6-331)) | ------IGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57463 for 2649 contacts (-21.7/contact) +
2D Compatibility (PS) -31507 + (NN) 9074 + (LL) 516
1D Compatibility (HY) 6000 + (ID) 2550
Total energy: -75930.0 ( -28.66 by residue)
QMean score : 0.183
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