Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLGIMGTNWITDSF--IEGAINSGEWNLTAVYSRTEEKARAFGEKYGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAELEHAHQIARENNVFLFEAARHIQEPNFKRLQENIEKVGTIHGATLAYMKYSSRYDQVLNGEEPNIFSLKFSGGSIVDLGVYPLYSAITLFG--EPVKATYFATKLPTGVDGLGPIILEYP-----TFNITII-QGKNSQSFLPSEIYGQKGTLIVDPLTGIEKITFYDNATKEETELAGPVVANDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK |
| 2O4U Chain:X ((3-245)) | LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ-GTLGDLRVARAEFGKNLTHV-----PRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDDTVTVLLQYPGEVHGSFTCSITAQLSNTAS-----VSGTKG----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109908 for 1799 contacts (-61.1/contact) +
2D Compatibility (PS) -25315 + (NN) -6411 + (LL) 7256
1D Compatibility (HY) -13600 + (ID) 3100
Total energy: -151078.0 ( -83.98 by residue)
QMean score : 0.421
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