Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIAALGLTLVLSGCAPKLDSNDKVVQKDDSKAETGIMTKNQISSNYYKTVLPYKASKSRGLVVSNIYSRYDINELESGLMRVSQNKYSPDNYLFQEGQYLDKETLEKWLDRKSDKNPNGLNPASNGNGENRKPIYLAHILEQDYLKQTDKDTVALGGISIALAMNSVDYYQKEKYGDTYEQPISDSELLAQGKEMSATVLNRIRQTKGLENVPVTIAIYKQGARDAVAPGNYIAYATANGDSLSNWKDIDEKNYVLPSTESAKDHKTDNDNFLNFKKAIEDYYPNFTGVVGRGRYEDGQLAELNIDIPLQFYGEAEIIGFTQYVTDLVGQHIPKTADLQVNISTSDGPAALITRKANEDAATAHIYD |
| 4PG4 Chain:A ((21-121)) | MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNK------------DIVIKHILVRDKSKKRPLNISQYHLTEDVNEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9397 for 392 contacts (-24.0/contact) +
2D Compatibility (PS) -6941 + (NN) 1163 + (LL) 16224
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -4201.0 ( -10.72 by residue)
QMean score : 0.162
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