Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFFLLFLVLTLLVVMPLLIAEFVIGRGSG----GDAVQAYKTLAPGTKWSLLGKLGVVGASILFSFYSVVGGWIITYLIKTLAGGIA---GENQASLLHDFQ--------VTTANPWI---SVGATILFIL---LNVIVISRGVVSGIEKMSKFMMPALFILFIVLIIRS--LTLPG--AMEGVAFFLRPDFSHFTAQTVLI-TLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAI-FPAAFSF----NITPDAGPG---LLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNA-GVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALFIAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFLF |
| 3QS4 Chain:A ((5-390)) | ----REHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPP-TDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGVGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIVFFSA-------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -368384 for 2954 contacts (-124.7/contact) +
2D Compatibility (PS) -36155 + (NN) -14160 + (LL) 9320
1D Compatibility (HY) -39600 + (ID) 6050
Total energy: -455029.0 ( -154.04 by residue)
QMean score : 0.369
|
|
|