Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRNLRGKAARIKEIR
2RDO Chain:P ((1-111))
-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKE--
General information:
TITO was launched using:
RESULT:
Template:
2RDO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 716498 for 5253 contacts (136.4/contact) +
2D Compatibility (PS) -10315 + (NN) -66 + (LL) 100
1D Compatibility (HY) 2400 + (ID) 650
Total energy: 707967.0 ( 134.77 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2RDO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RDO-query.scw
PDB file :
Tito_Scwrl_2RDO.pdb
: