Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTAHAQEFVPPLSFQVLSKNDVYTDTFDEKKS-----SVVAHIDLADWADLVIVAPATANVIGKMANGIADDMVTTTILATE--APVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVGRGRLEEPEKIVLRIAEFFQEDKNLLQGKNVLVTAGATREKLDPVRYFTNHSTGKMGFSIAESAARHGANVTLITTSKALPVPHGVEAIYVESAEEMHQAVNERKVSQDIFVMTAAVADYTPAQVSDQKIKKQPGDFTIAMKRTKDILLEIGQHKTSEQVVIGFAAETENVEANARKKLTSKNADMIVANNISEAGAGFSGDTNIVTFYRKDGSSEALPILDKKEVAEHIIKEAANFLRK |
| 1E20 Chain:A ((22-198)) | -----VLLAASGSVAAIKFGNLCHCFTE-WAEVRAVVTKSSLHFLDKLSLP--QEVTLYTDE-DEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFWE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126475 for 1436 contacts (-88.1/contact) +
2D Compatibility (PS) -18291 + (NN) -3892 + (LL) 16536
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -149722.0 ( -104.26 by residue)
QMean score : 0.449
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