Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATVEFEKGQVMEDALIDAVEEAGYEVA
2L3M Chain:A ((4-70))
MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV-
General information:
TITO was launched using:
RESULT:
Template:
2L3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47736 for 471 contacts (-101.4/contact) +
2D Compatibility (PS) -7259 + (NN) -291 + (LL) 144
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -64092.0 ( -136.08 by residue)
QMean score : 0.785
(partial model without unconserved sides chains):
PDB file :
Tito_2L3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3M-query.scw
PDB file :
Tito_Scwrl_2L3M.pdb
: