Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAEFIAIKLGLEEALKKQATLIRLYSDSKVA----IEAIHKRHAKNPLFK-----PHLDAILEMADSLELFFAEWRNV------SQNKQADQLARQAIKKQKQPGVK
2E4L Chain:A ((7-142))
IHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVAL-EALKEPCKII-LTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAA----------
General information:
TITO was launched using:
RESULT:
Template:
2E4L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45183 for 906 contacts (-49.9/contact) +
2D Compatibility (PS) -13100 + (NN) -5461 + (LL) 784
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -71460.0 ( -78.87 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_2E4L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E4L-query.scw
PDB file :
Tito_Scwrl_2E4L.pdb
: