Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEMVEFSSLDVPVFGNLSEMLEEI--KPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFP---NVEIIELHHDNKLDAPSGTGVKTAEMMAETREFVKQGAADEVEL-----IEGARGAEYEGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD |
| 4F3Y Chain:A ((8-269)) | MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGV--ALTDDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE--KIALVFSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKVDAPSG----TALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIG--FSAIRGGDIVGDHTVLFAGIGERIEITHKSASRVSYAQGALRAARFLAGRDAGFFDMQDVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123180 for 2034 contacts (-60.6/contact) +
2D Compatibility (PS) -26978 + (NN) -9013 + (LL) 364
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -176057.0 ( -86.56 by residue)
QMean score : 0.505
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