Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLK----ISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVP-IVASGSV---ITISAGIANYDGR-NYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI |
| 2V0N Chain:A ((279-448)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNLDHSLELA-VTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLP-----CRYGGEEFVVIMPDTALADALRIAERIRMHVSG--SPFTVAHGREMLNVTISIGVSATAGEGDTPEA--LLKRADEGVYQAKASGRNAV--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2V0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91819 for 1166 contacts (-78.7/contact) +
2D Compatibility (PS) -17497 + (NN) -7985 + (LL) 19912
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -112389.0 ( -96.39 by residue)
QMean score : 0.506
|
|
|