Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKN--RTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGK----VTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
2V0N Chain:A ((286-448)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAI---DLPCRYGGEEFVVIMPDTALADALRIAERIRMHV--SGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95780 for 1163 contacts (-82.4/contact) +
2D Compatibility (PS) -17264 + (NN) -7678 + (LL) 20048
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -114974.0 ( -98.86 by residue)
QMean score : 0.521
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