Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEITVRAKSKTYPVYINEFALEDIREKWTKSLAKFSHVFVLTDGHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKMIETGLDRKAVLIAFGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAH-DSAVGGKVAINHPLGKNMIGNFYQPEAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKDFYTKDLTPFLQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYALTMSETIYGLDFDLAE-FKTWLEQLGYDTTFDASVPFSKILENMRHDKKTTFNEISMVLLEEIGKP-VIFKADDDLIFETYKRVMRKGGNVI |
| 3QBD Chain:A ((78-366)) | ----------------------------------------------------------------------PDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAA-----ELREILNYGHTLGHAIERRERY-RWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPDA-LPQLLEIMAG-------VLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVC------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202952 for 2256 contacts (-90.0/contact) +
2D Compatibility (PS) -29337 + (NN) -8408 + (LL) 6688
1D Compatibility (HY) -24000 + (ID) 4750
Total energy: -262759.0 ( -116.47 by residue)
QMean score : 0.572
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