Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMED--PFLKKRISQITEETPAEE-IAVLVEEVKKTGA-----KQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
| 3WJO Chain:A ((52-333)) | --------------------------------------YIVSGGGKRIRPMIAVLAAR-AVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMN---------NYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA--------VGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEA----DKAIAALQVLPDTPWREALIGLAHIAV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132953 for 2090 contacts (-63.6/contact) +
2D Compatibility (PS) -27641 + (NN) -11838 + (LL) 4668
1D Compatibility (HY) -14400 + (ID) 4400
Total energy: -186564.0 ( -89.27 by residue)
QMean score : 0.483
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