Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKA--EIKVVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVS---LPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTV--RDEALLFRLGYFSDQEKARLKEK-AVGDICSRFFTIDGEIADE-KMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
| 4GO1 Chain:A ((15-315)) | ---EEEQVA-RIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLAD--ADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGG-----VGSY------MTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQ--------------GEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAIL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129741 for 2299 contacts (-56.4/contact) +
2D Compatibility (PS) -30801 + (NN) -14450 + (LL) 2652
1D Compatibility (HY) -24400 + (ID) 4300
Total energy: -201040.0 ( -87.45 by residue)
QMean score : 0.501
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