Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAKKPLFEVIASEIKDSINRDEYKTGMLMPNETALQEIFSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTSQNILEMTGVMKTDTNENLKKDIKDFYIRKAGKFYAEKFGIKENELVYSIKFVQKSENGVTLDRLILPLSLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAGNEQIKNMHINENDPVFKLSSVFYAENEMPIAIQYHYEDAESTKYVVDFN
4U0Y Chain:A ((13-77))
-----PIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFV-------------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4U0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42568 for 414 contacts (-102.8/contact) +
2D Compatibility (PS) -7244 + (NN) -2404 + (LL) 12696
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -45920.0 ( -110.92 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_4U0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0Y-query.scw
PDB file :
Tito_Scwrl_4U0Y.pdb
: