Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNRFYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM
2K1S Chain:A ((6-45))
-----------------------------------------------------------------------------------------------------QEAKLRDKMRGT----GVSVTRSGDNIILNMPNNVTFDSSSATL-------
General information:
TITO was launched using:
RESULT:
Template:
2K1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14732 for 177 contacts (-83.2/contact) +
2D Compatibility (PS) -4179 + (NN) -1721 + (LL) 9268
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -13714.0 ( -77.48 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2K1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1S-query.scw
PDB file :
Tito_Scwrl_2K1S.pdb
: