Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDG-DMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGTLEKLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA
1WS6 Chain:A ((16-168))
VRILGGKARGVALK-VPAS-ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGAR--VVALPVEVFLPEAKAQGERFTVAFMAPPY-AMDLAALFGELLASGLVEAGGLYVLQHPKDLYLP---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WS6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36423 for 1188 contacts (-30.7/contact) +
2D Compatibility (PS) -16083 + (NN) -6479 + (LL) 2528
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -62357.0 ( -52.49 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1WS6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WS6-query.scw
PDB file :
Tito_Scwrl_1WS6.pdb
: